IL_9E16_062
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CACCC*GCGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_062 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3259
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.5
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
9E16|1|I|C|1574
9E16|1|I|A|1575
9E16|1|I|C|1576
9E16|1|I|C|1577
9E16|1|I|C|1578
*
9E16|1|I|G|1626
9E16|1|I|C|1627
9E16|1|I|G|1628
9E16|1|I|U|1629
9E16|1|I|G|1630
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
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