IL_9E16_071

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGGUAG*UGAGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E16_071 not in the Motif Atlas

Geometric match to IL_8GLP_291

Geometric discrepancy: 0.3764

The information below is about IL_8GLP_291

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46203.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

9E16|1|I|C|1711
9E16|1|I|G|1712
9E16|1|I|G|1713
9E16|1|I|U|1714
9E16|1|I|A|1715
9E16|1|I|G|1716
*
9E16|1|I|U|1752
9E16|1|I|G|1753
9E16|1|I|A|1754
9E16|1|I|G|1755
9E16|1|I|A|1756
9E16|1|I|G|1757

Current chains

Chain I

23S ribosomal RNA

Nearby chains