IL_9E16_113
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_113 not in the Motif Atlas
- Homologous match to IL_8B0X_161
- Geometric discrepancy: 0.059
- The information below is about IL_8B0X_161
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9E16|1|I|C|2890
9E16|1|I|U|2891
9E16|1|I|A|2892
9E16|1|I|G|2893
9E16|1|I|U|2894
9E16|1|I|A|2895
9E16|1|I|C|2896
*
9E16|1|I|G|2901
9E16|1|I|G|2902
9E16|1|I|A|2903
9E16|1|I|C|2904
9E16|1|I|C|2905
9E16|1|I|G|2906
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
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