IL_9E16_153
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_153 not in the Motif Atlas
- Homologous match to IL_8B0X_035
- Geometric discrepancy: 0.0792
- The information below is about IL_8B0X_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29346.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
9E16|1|a|G|765
9E16|1|a|G|766
9E16|1|a|G|767
9E16|1|a|A|768
9E16|1|a|G|769
*
9E16|1|a|U|795
9E16|1|a|C|796
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: