IL_9E16_166
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 9E16|1|a|C|1192, 9E16|1|a|A|1193
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_166 not in the Motif Atlas
- Homologous match to IL_8B0X_047
- Geometric discrepancy: 0.0978
- The information below is about IL_8B0X_047
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_41261.1
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
9E16|1|a|G|1048
9E16|1|a|G|1049
*
9E16|1|a|U|1191
9E16|1|a|C|1192
9E16|1|a|A|1193
9E16|1|a|U|1194
9E16|1|a|C|1195
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 9
- 30S ribosomal protein S14 C-
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
Coloring options: