IL_9E1S_021
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- AGAG*UGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E1S_021 not in the Motif Atlas
- Homologous match to IL_8B0X_076
- Geometric discrepancy: 0.0908
- The information below is about IL_8B0X_076
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9E1S|1|I|A|624
9E1S|1|I|G|625
9E1S|1|I|A|626
9E1S|1|I|G|627
*
9E1S|1|I|U|656
9E1S|1|I|G|657
9E1S|1|I|A|658
9E1S|1|I|U|659
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
Coloring options: