IL_9E1S_069

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CGAAG*CUAG

Length

9 nucleotides

Bulged bases

9E1S|1|I|A|1657

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E1S_069 not in the Motif Atlas

Geometric match to IL_8GLP_158

Geometric discrepancy: 0.3628

The information below is about IL_8GLP_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46211.1

Basepair signature

cWW-tWW-tHS-cWW

Number of instances in this motif group

2

Unit IDs

9E1S|1|I|C|1655
9E1S|1|I|G|1656
9E1S|1|I|A|1657
9E1S|1|I|A|1658
9E1S|1|I|G|1659
*
9E1S|1|I|C|1814
9E1S|1|I|U|1815
9E1S|1|I|A|1816
9E1S|1|I|G|1817

Current chains

Chain I

23S ribosomal RNA

Nearby chains