IL_9E1S_115
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- UUGAG*CAAGAUCAG
- Length
- 14 nucleotides
- Bulged bases
- 9E1S|1|I|C|3018
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E1S_115 not in the Motif Atlas
- Homologous match to IL_7A0S_093
- Geometric discrepancy: 0.117
- The information below is about IL_7A0S_093
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9E1S|1|I|U|2874
9E1S|1|I|U|2875
9E1S|1|I|G|2876
9E1S|1|I|A|2877
9E1S|1|I|G|2878
*
9E1S|1|I|C|3012
9E1S|1|I|A|3013
9E1S|1|I|A|3014
9E1S|1|I|G|3015
9E1S|1|I|A|3016
9E1S|1|I|U|3017
9E1S|1|I|C|3018
9E1S|1|I|A|3019
9E1S|1|I|G|3020
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
Coloring options: