IL_9E6Q_006
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- GGAAAG*UUAGUAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
9E6Q|1|1|G|169
9E6Q|1|1|G|170
9E6Q|1|1|A|171
9E6Q|1|1|A|172
9E6Q|1|1|A|173
9E6Q|1|1|G|174
*
9E6Q|1|1|U|183
9E6Q|1|1|U|184
9E6Q|1|1|A|185
9E6Q|1|1|G|186
9E6Q|1|1|U|187
9E6Q|1|1|A|188
9E6Q|1|1|C|189
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AH
- Large ribosomal subunit protein eL13
- Chain AL
- Large ribosomal subunit protein uL15
- Chain AM
- 50S ribosomal protein L15e
- Chain Ad
- Large ribosomal subunit protein eL37
- Chain Ah
- eL42
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