IL_9EC3_145
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 9EC3|1|a|A|693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_145 not in the Motif Atlas
- Homologous match to IL_8B0X_034
- Geometric discrepancy: 0.3134
- The information below is about IL_8B0X_034
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9EC3|1|a|U|675
9EC3|1|a|G|676
9EC3|1|a|U|677
9EC3|1|a|A|678
9EC3|1|a|G|679
*
9EC3|1|a|C|690
9EC3|1|a|G|691
9EC3|1|a|C|692
9EC3|1|a|A|693
9EC3|1|a|G|694
9EC3|1|a|A|695
9EC3|1|a|U|696
9EC3|1|a|A|697
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
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