IL_9EC3_177
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_177 not in the Motif Atlas
- Homologous match to IL_8B0X_062
- Geometric discrepancy: 0.2432
- The information below is about IL_8B0X_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9EC3|1|a|C|1423
9EC3|1|a|C|1424
9EC3|1|a|G|1425
9EC3|1|a|A|1426
9EC3|1|a|A|1427
9EC3|1|a|G|1428
*
9EC3|1|a|C|1459
9EC3|1|a|G|1460
9EC3|1|a|A|1461
9EC3|1|a|A|1462
9EC3|1|a|G|1463
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- Large ribosomal subunit protein uL14
- Chain P
- 50S ribosomal protein L19
- Chain t
- 30S ribosomal protein S20
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