IL_9F1B_034
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GUGCCAG*CGG(OMU)AAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9F1B|1|A2|A|629
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_034 not in the Motif Atlas
- Homologous match to IL_8C3A_425
- Geometric discrepancy: 0.1925
- The information below is about IL_8C3A_425
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.2
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9F1B|1|A2|G|612
9F1B|1|A2|U|613
9F1B|1|A2|G|614
9F1B|1|A2|C|615
9F1B|1|A2|C|616
9F1B|1|A2|A|617
9F1B|1|A2|G|618
*
9F1B|1|A2|C|625
9F1B|1|A2|G|626
9F1B|1|A2|G|627
9F1B|1|A2|OMU|628
9F1B|1|A2|A|629
9F1B|1|A2|A|630
9F1B|1|A2|U|631
9F1B|1|A2|U|632
9F1B|1|A2|C|633
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AD
- 40S ribosomal protein S30
- Chain Ac
- 40S ribosomal protein S3
- Chain Aw
- 40S ribosomal protein S23
Coloring options: