IL_9F1B_066
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9F1B|1|A2|C|1216, 9F1B|1|A2|C|1217
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_066 not in the Motif Atlas
- Homologous match to IL_8C3A_449
- Geometric discrepancy: 0.1052
- The information below is about IL_8C3A_449
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.10
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 16
Unit IDs
9F1B|1|A2|A|1215
9F1B|1|A2|C|1216
9F1B|1|A2|C|1217
9F1B|1|A2|A|1218
*
9F1B|1|A2|U|1682
9F1B|1|A2|C|1683
9F1B|1|A2|C|1684
9F1B|1|A2|C|1685
9F1B|1|A2|U|1686
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S28
- Chain AE
- Small ribosomal subunit protein eS26
- Chain AT
- P-site tRNA
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain At
- Small ribosomal subunit protein uS10
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