IL_9F1B_360
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UGUA(PSU)(OMG)*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 9F1B|1|B5|U|4380, 9F1B|1|B5|PSU|4382
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_360 not in the Motif Atlas
- Homologous match to IL_8P9A_346
- Geometric discrepancy: 0.2246
- The information below is about IL_8P9A_346
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21001.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9F1B|1|B5|U|4378
9F1B|1|B5|G|4379
9F1B|1|B5|U|4380
9F1B|1|B5|A|4381
9F1B|1|B5|PSU|4382
9F1B|1|B5|OMG|4383
*
9F1B|1|B5|C|4408
9F1B|1|B5|G|4409
9F1B|1|B5|A|4410
9F1B|1|B5|A|4411
9F1B|1|B5|G|4412
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BW
- Ribosomal protein L24
- Chain Bd
- 60S ribosomal protein L31
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