IL_9F1C_191
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- UAUAGACAG*CCGAA
- Length
- 14 nucleotides
- Bulged bases
- 9F1C|1|B5|A|1899
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1C_191 not in the Motif Atlas
- Homologous match to IL_5TBW_054
- Geometric discrepancy: 0.1778
- The information below is about IL_5TBW_054
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90538.5
- Basepair signature
- cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9F1C|1|B5|U|1896
9F1C|1|B5|A|1897
9F1C|1|B5|U|1898
9F1C|1|B5|A|1899
9F1C|1|B5|G|1900
9F1C|1|B5|A|1901
9F1C|1|B5|C|1902
9F1C|1|B5|A|1903
9F1C|1|B5|G|1904
*
9F1C|1|B5|C|1961
9F1C|1|B5|C|1962
9F1C|1|B5|G|1963
9F1C|1|B5|A|1964
9F1C|1|B5|A|1965
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BH
- 60S ribosomal protein L9
- Chain BS
- Large ribosomal subunit protein eL20
- Chain Bm
- Large ribosomal subunit protein eL40
- Chain Bs
- Large ribosomal subunit protein uL10
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