IL_9F1C_343
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1C_343 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.1966
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
9F1C|1|B5|C|1850
9F1C|1|B5|G|1851
9F1C|1|B5|C|1852
9F1C|1|B5|C|1853
9F1C|1|B5|C|1854
9F1C|1|B5|G|1855
9F1C|1|B5|A|1856
9F1C|1|B5|U|1857
*
9F1C|1|B5|G|2003
9F1C|1|B5|G|2004
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BF
- Ribosomal Protein uL30
- Chain BO
- Large ribosomal subunit protein uL13
- Chain BS
- Large ribosomal subunit protein eL20
- Chain Bf
- 60S ribosomal protein L35a
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