IL_9F1D_052
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 9F1D|1|A2|G|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_052 not in the Motif Atlas
- Homologous match to IL_8C3A_438
- Geometric discrepancy: 0.1018
- The information below is about IL_8C3A_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_54697.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 51
Unit IDs
9F1D|1|A2|C|932
9F1D|1|A2|G|933
9F1D|1|A2|G|934
9F1D|1|A2|G|935
9F1D|1|A2|G|936
*
9F1D|1|A2|C|1008
9F1D|1|A2|A|1009
9F1D|1|A2|A|1010
9F1D|1|A2|G|1011
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- Small ribosomal subunit protein eS26
- Chain Aa
- 40S ribosomal protein S3a
- Chain Am
- 40S ribosomal protein S13
- Chain Bc
- 60S ribosomal protein L30
Coloring options: