IL_9F58_001
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACGGAUC*GUGAAAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_001 not in the Motif Atlas
- Geometric match to IL_8P9A_244
- Geometric discrepancy: 0.0493
- The information below is about IL_8P9A_244
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
9F58|1|4|A|13
9F58|1|4|C|14
9F58|1|4|G|15
9F58|1|4|G|16
9F58|1|4|A|17
9F58|1|4|U|18
9F58|1|4|C|19
*
9F58|1|a|G|404
9F58|1|a|U|405
9F58|1|a|G|406
9F58|1|a|A|407
9F58|1|a|A|408
9F58|1|a|A|409
9F58|1|a|U|410
Current chains
- Chain 4
- 5.8S rRNA
- Chain a
- 25S rRNA
Nearby chains
- Chain 3
- 60S ribosomal protein L4-A
- Chain Q
- 60S ribosomal protein L32
- Chain q
- 60S ribosomal protein L17-A
Coloring options: