IL_9F58_070
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 9F58|1|a|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_070 not in the Motif Atlas
- Homologous match to IL_8CRE_076
- Geometric discrepancy: 0.0836
- The information below is about IL_8CRE_076
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_00981.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F58|1|a|U|1694
9F58|1|a|U|1695
9F58|1|a|A|1696
9F58|1|a|A|1697
9F58|1|a|C|1698
*
9F58|1|a|G|1747
9F58|1|a|G|1748
9F58|1|a|A|1749
9F58|1|a|A|1750
9F58|1|a|G|1751
9F58|1|a|A|1752
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain S
- 60S ribosomal protein L34-A
- Chain W
- 60S ribosomal protein L38
Coloring options: