IL_9F58_073
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AAUAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_073 not in the Motif Atlas
- Homologous match to IL_8CRE_079
- Geometric discrepancy: 0.0848
- The information below is about IL_8CRE_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22829.2
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9F58|1|a|A|1883
9F58|1|a|A|1884
9F58|1|a|U|1885
9F58|1|a|A|1886
9F58|1|a|A|1887
9F58|1|a|U|1888
9F58|1|a|G|1889
*
9F58|1|a|C|2346
9F58|1|a|U|2347
9F58|1|a|A|2348
9F58|1|a|U|2349
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain O
- 60S ribosomal protein L31-A
- Chain d
- 60S ribosomal protein L3
- Chain q
- 60S ribosomal protein L17-A
Coloring options: