IL_9F58_077
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9F58|1|a|G|2335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_077 not in the Motif Atlas
- Homologous match to IL_8P9A_306
- Geometric discrepancy: 0.0787
- The information below is about IL_8P9A_306
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9F58|1|a|A|1901
9F58|1|a|G|1902
9F58|1|a|U|1903
9F58|1|a|C|1904
9F58|1|a|G|1905
9F58|1|a|G|1906
*
9F58|1|a|C|2333
9F58|1|a|U|2334
9F58|1|a|G|2335
9F58|1|a|U|2336
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain d
- 60S ribosomal protein L3
- Chain w
- 60S ribosomal protein L23-A
Coloring options: