IL_9F58_098
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAU*AGUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_098 not in the Motif Atlas
- Homologous match to IL_8P9A_326
- Geometric discrepancy: 0.0826
- The information below is about IL_8P9A_326
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
9F58|1|a|C|2666
9F58|1|a|A|2667
9F58|1|a|U|2668
*
9F58|1|a|A|2686
9F58|1|a|G|2687
9F58|1|a|U|2688
9F58|1|a|A|2689
9F58|1|a|G|2690
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain e
- 60S ribosomal protein L5
- Chain k
- 60S ribosomal protein L11-A
- Chain u
- 60S ribosomal protein L21-A
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