IL_9F58_119
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 9F58|1|a|A|3130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_119 not in the Motif Atlas
- Homologous match to IL_8CRE_129
- Geometric discrepancy: 0.0876
- The information below is about IL_8CRE_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9F58|1|a|A|3103
9F58|1|a|U|3104
9F58|1|a|U|3105
9F58|1|a|A|3106
9F58|1|a|U|3107
*
9F58|1|a|A|3127
9F58|1|a|G|3128
9F58|1|a|A|3129
9F58|1|a|A|3130
9F58|1|a|U|3131
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain Y
- Ubiquitin-60S ribosomal protein L40
- Chain i
- 60S ribosomal protein L9-A
- Chain p
- 60S ribosomal protein L16-A
Coloring options: