IL_9F58_132
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 9F58|1|a|G|3369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F58_132 not in the Motif Atlas
- Homologous match to IL_8P9A_360
- Geometric discrepancy: 0.062
- The information below is about IL_8P9A_360
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9F58|1|a|U|3332
9F58|1|a|G|3333
9F58|1|a|U|3334
9F58|1|a|A|3335
9F58|1|a|A|3336
9F58|1|a|G|3337
*
9F58|1|a|C|3367
9F58|1|a|U|3368
9F58|1|a|G|3369
9F58|1|a|A|3370
9F58|1|a|G|3371
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain O
- 60S ribosomal protein L31-A
- Chain d
- 60S ribosomal protein L3
- Chain y
- 60S ribosomal protein L24-A
Coloring options: