IL_9F9S_293
3D structure
- PDB id
- 9F9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast SDD1 Disome with Mbf1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 9F9S|1|R1|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F9S_293 not in the Motif Atlas
- Homologous match to IL_8C3A_394
- Geometric discrepancy: 0.132
- The information below is about IL_8C3A_394
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_30569.1
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F9S|1|R1|U|37
9F9S|1|R1|C|38
9F9S|1|R1|A|39
9F9S|1|R1|A|40
9F9S|1|R1|A|41
*
9F9S|1|R1|U|466
9F9S|1|R1|G|467
9F9S|1|R1|A|468
9F9S|1|R1|C|469
9F9S|1|R1|A|470
9F9S|1|R1|A|471
Current chains
- Chain R1
- Saccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1)
Nearby chains
- Chain Re
- 40S ribosomal protein S4-A
- Chain Rj
- 40S ribosomal protein S9-A
- Chain Ry
- 40S ribosomal protein S24-A
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