IL_9G33_016
3D structure
- PDB id
- 9G33 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stalled 90S - Utp23-Krr1-deltaC3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G33_016 not in the Motif Atlas
- Geometric match to IL_280D_001
- Geometric discrepancy: 0.1163
- The information below is about IL_280D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
9G33|1|D2|G|346
9G33|1|D2|U|347
9G33|1|D2|U|348
9G33|1|D2|G|349
*
9G33|1|D2|C|375
9G33|1|D2|U|376
9G33|1|D2|U|377
9G33|1|D2|C|378
Current chains
- Chain D2
- 5' ETS
Nearby chains
- Chain JN
- Protein FAF1
- Chain JO
- KRR1 small subunit processome component
- Chain UG
- U3 small nucleolar RNA-associated protein 7
- Chain UN
- U3 small nucleolar RNA-associated protein 14
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