IL_9G6J_028
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CUGAUG*CGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_028 not in the Motif Atlas
- Homologous match to IL_8CRE_028
- Geometric discrepancy: 0.0745
- The information below is about IL_8CRE_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
9G6J|1|1|C|754
9G6J|1|1|U|755
9G6J|1|1|G|756
9G6J|1|1|A|757
9G6J|1|1|U|758
9G6J|1|1|G|759
*
9G6J|1|1|C|764
9G6J|1|1|G|765
9G6J|1|1|G|766
9G6J|1|1|A|767
9G6J|1|1|U|768
9G6J|1|1|G|769
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain t
- 60S ribosomal protein L13
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