IL_9G6J_033
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_033 not in the Motif Atlas
- Homologous match to IL_8CRE_033
- Geometric discrepancy: 0.0504
- The information below is about IL_8CRE_033
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9G6J|1|1|U|830
9G6J|1|1|G|831
9G6J|1|1|A|832
9G6J|1|1|A|833
9G6J|1|1|G|834
*
9G6J|1|1|U|851
9G6J|1|1|G|852
9G6J|1|1|G|853
9G6J|1|1|A|854
9G6J|1|1|G|855
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain z
- Ribosomal protein L19
Coloring options: