IL_9G6J_043
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GCGAAU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|1|G|997
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_043 not in the Motif Atlas
- Homologous match to IL_8P9A_268
- Geometric discrepancy: 0.0569
- The information below is about IL_8P9A_268
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26222.2
- Basepair signature
- cWW-cWS-cSH-tWH-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
9G6J|1|1|G|995
9G6J|1|1|C|996
9G6J|1|1|G|997
9G6J|1|1|A|998
9G6J|1|1|A|999
9G6J|1|1|U|1000
*
9G6J|1|1|A|1042
9G6J|1|1|A|1043
9G6J|1|1|A|1044
9G6J|1|1|C|1045
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain m
- Ribosomal 60S subunit protein L5
- Chain r
- Ribosomal 60S subunit protein L10
Coloring options: