IL_9G6J_106
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- U(OMC)AAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_106 not in the Motif Atlas
- Homologous match to IL_8P9A_333
- Geometric discrepancy: 0.091
- The information below is about IL_8P9A_333
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
9G6J|1|1|U|2807
9G6J|1|1|OMC|2808
9G6J|1|1|A|2809
9G6J|1|1|A|2810
9G6J|1|1|G|2811
*
9G6J|1|1|C|2821
9G6J|1|1|G|2822
9G6J|1|1|A|2823
9G6J|1|1|C|2824
9G6J|1|1|A|2825
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AN
- Rpl40bp
- Chain AT
- Transfer RNA; tRNA
- Chain r
- Ribosomal 60S subunit protein L10
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