IL_9G6J_121
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 9G6J|1|1|A|3102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_121 not in the Motif Atlas
- Homologous match to IL_8P9A_348
- Geometric discrepancy: 0.0736
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9G6J|1|1|A|3075
9G6J|1|1|U|3076
9G6J|1|1|U|3077
9G6J|1|1|A|3078
9G6J|1|1|U|3079
*
9G6J|1|1|A|3099
9G6J|1|1|G|3100
9G6J|1|1|A|3101
9G6J|1|1|A|3102
9G6J|1|1|U|3103
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AN
- Rpl40bp
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain w
- Ribosomal 60S subunit protein L16A
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