IL_9G6J_128
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUUG*CUUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_128 not in the Motif Atlas
- Homologous match to IL_8CRE_135
- Geometric discrepancy: 0.0783
- The information below is about IL_8CRE_135
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
9G6J|1|1|U|3265
9G6J|1|1|U|3266
9G6J|1|1|U|3267
9G6J|1|1|G|3268
*
9G6J|1|1|C|3276
9G6J|1|1|U|3277
9G6J|1|1|U|3278
9G6J|1|1|A|3279
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AE
- Ribosomal 60S subunit protein L31B
- Chain k
- 60S ribosomal protein L3
- Chain x
- Ribosomal 60S subunit protein L17B
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