IL_9G6J_137
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GAAAGCA*UUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_137 not in the Motif Atlas
- Homologous match to IL_8OI5_135
- Geometric discrepancy: 0.056
- The information below is about IL_8OI5_135
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_41504.1
- Basepair signature
- cWW-tSH-L-R-L-tHH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9G6J|1|3|G|21
9G6J|1|3|A|22
9G6J|1|3|A|23
9G6J|1|3|A|24
9G6J|1|3|G|25
9G6J|1|3|C|26
9G6J|1|3|A|27
*
9G6J|1|3|U|53
9G6J|1|3|U|54
9G6J|1|3|A|55
9G6J|1|3|A|56
9G6J|1|3|G|57
9G6J|1|3|C|58
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain m
- Ribosomal 60S subunit protein L5
- Chain s
- Ribosomal 60S subunit protein L11B
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