IL_9G6J_164
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_164 not in the Motif Atlas
- Homologous match to IL_8CRE_409
- Geometric discrepancy: 0.1607
- The information below is about IL_8CRE_409
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99380.1
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 1
Unit IDs
9G6J|1|A|U|316
9G6J|1|A|U|317
9G6J|1|A|U|318
9G6J|1|A|C|319
9G6J|1|A|G|320
9G6J|1|A|A|321
*
9G6J|1|A|U|343
9G6J|1|A|G|344
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 40S ribosomal protein S8
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain z
- Ribosomal protein L19
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