IL_9G6J_180
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_180 not in the Motif Atlas
- Homologous match to IL_8P9A_413
- Geometric discrepancy: 0.0709
- The information below is about IL_8P9A_413
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
9G6J|1|A|U|733
9G6J|1|A|U|734
9G6J|1|A|U|735
*
9G6J|1|A|A|783
9G6J|1|A|U|784
9G6J|1|A|G|785
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain I
- 40S ribosomal protein S7
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain X
- 40S ribosomal protein S22-A
Coloring options: