IL_9G6J_193
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GUUGU*ACGC
- Length
- 9 nucleotides
- Bulged bases
- 9G6J|1|A|G|1038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_193 not in the Motif Atlas
- Geometric match to IL_8UIW_002
- Geometric discrepancy: 0.3823
- The information below is about IL_8UIW_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
9G6J|1|A|G|1035
9G6J|1|A|U|1036
9G6J|1|A|U|1037
9G6J|1|A|G|1038
9G6J|1|A|U|1039
*
9G6J|1|A|A|1050
9G6J|1|A|C|1051
9G6J|1|A|G|1052
9G6J|1|A|C|1053
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain B
- 40S ribosomal protein S0
- Chain C
- 40S ribosomal protein S1
- Chain c
- 40S ribosomal protein S27
Coloring options: