IL_9G6J_213
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_213 not in the Motif Atlas
- Geometric match to IL_8CRE_461
- Geometric discrepancy: 0.0952
- The information below is about IL_8CRE_461
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94684.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9G6J|1|A|C|1375
9G6J|1|A|U|1376
9G6J|1|A|A|1377
*
9G6J|1|A|U|1393
9G6J|1|A|G|1394
9G6J|1|A|G|1395
9G6J|1|A|A|1396
9G6J|1|A|A|1397
9G6J|1|A|G|1398
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain G
- Ribosomal 40S subunit protein S5
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain S
- Ribosomal 40S subunit protein S17B
- Chain h
- Guanine nucleotide-binding protein subunit beta-like protein
Coloring options: