IL_9G6J_214
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G6J_214 not in the Motif Atlas
- Homologous match to IL_8CRE_462
- Geometric discrepancy: 0.0682
- The information below is about IL_8CRE_462
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91698.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9G6J|1|A|G|1466
9G6J|1|A|C|1467
9G6J|1|A|C|1468
9G6J|1|A|A|1469
9G6J|1|A|G|1470
9G6J|1|A|C|1471
9G6J|1|A|G|1472
9G6J|1|A|A|1473
*
9G6J|1|A|U|1506
9G6J|1|A|U|1507
9G6J|1|A|G|1508
9G6J|1|A|U|1509
9G6J|1|A|G|1510
9G6J|1|A|A|1511
9G6J|1|A|A|1512
9G6J|1|A|A|1513
9G6J|1|A|C|1514
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain G
- Ribosomal 40S subunit protein S5
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain a
- 40S ribosomal protein S25
- Chain e
- Ribosomal 40S subunit protein S29A
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