IL_9GFT_036
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_036 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.096
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
9GFT|1|0|G|774
9GFT|1|0|G|775
9GFT|1|0|G|776
9GFT|1|0|A|777
9GFT|1|0|G|778
*
9GFT|1|0|U|804
9GFT|1|0|C|805
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS11
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- Large ribosomal subunit protein uL2
Coloring options: