IL_9GFT_091
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_091 not in the Motif Atlas
- Homologous match to IL_6CZR_406
- Geometric discrepancy: 0.5357
- The information below is about IL_6CZR_406
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26564.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GFT|1|AA|G|450
9GFT|1|AA|A|451
9GFT|1|AA|A|452
9GFT|1|AA|G|453
9GFT|1|AA|G|454
9GFT|1|AA|G|455
*
9GFT|1|AA|C|477
9GFT|1|AA|A|478
9GFT|1|AA|U|479
9GFT|1|AA|U|480
9GFT|1|AA|G|481
9GFT|1|AA|A|482
9GFT|1|AA|C|483
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AO
- Small ribosomal subunit protein bS16
- Chain U
- Large ribosomal subunit protein bL9
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