IL_9GFT_118
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_118 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.1085
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
9GFT|1|AA|G|1061
9GFT|1|AA|U|1062
9GFT|1|AA|C|1063
*
9GFT|1|AA|G|1193
9GFT|1|AA|U|1194
9GFT|1|AA|C|1195
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- Small ribosomal subunit protein uS3
- Chain AE
- Small ribosomal subunit protein uS5
- Chain AJ
- Small ribosomal subunit protein uS10
- Chain AM
- Small ribosomal subunit protein uS14
- Chain w
- messenger RNA
Coloring options: