IL_9GFT_156
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9GFT|1|AV|G|776, 9GFT|1|AV|A|788, 9GFT|1|AV|A|789, 9GFT|1|AV|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_156 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.0888
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
9GFT|1|AV|G|775
9GFT|1|AV|G|776
9GFT|1|AV|G|777
*
9GFT|1|AV|C|787
9GFT|1|AV|A|788
9GFT|1|AV|A|789
9GFT|1|AV|U|790
9GFT|1|AV|C|791
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AX
- Large ribosomal subunit protein uL2
- Chain AZ
- Large ribosomal subunit protein uL4
- Chain An
- Large ribosomal subunit protein uL22
- Chain Ax
- Large ribosomal subunit protein bL34
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