IL_9GFT_183
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_183 not in the Motif Atlas
- Homologous match to IL_5J7L_292
- Geometric discrepancy: 0.1455
- The information below is about IL_5J7L_292
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9GFT|1|AV|C|1351
9GFT|1|AV|U|1352
9GFT|1|AV|A|1353
9GFT|1|AV|A|1354
9GFT|1|AV|G|1355
*
9GFT|1|AV|C|1376
9GFT|1|AV|G|1377
9GFT|1|AV|A|1378
9GFT|1|AV|U|1379
9GFT|1|AV|G|1380
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AX
- Large ribosomal subunit protein uL2
- Chain Ax
- Large ribosomal subunit protein bL34
Coloring options: