IL_9GFT_233
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 9GFT|1|AV|G|2576, 9GFT|1|AV|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_233 not in the Motif Atlas
- Homologous match to IL_5J7L_340
- Geometric discrepancy: 0.1111
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
9GFT|1|AV|C|2510
9GFT|1|AV|U|2511
9GFT|1|AV|C|2512
*
9GFT|1|AV|G|2574
9GFT|1|AV|C|2575
9GFT|1|AV|G|2576
9GFT|1|AV|A|2577
9GFT|1|AV|G|2578
Current chains
- Chain AV
- 23S RNA
Nearby chains
- Chain AY
- 50S ribosomal protein L3
- Chain Av
- Large ribosomal subunit protein bL32
Coloring options: