IL_9GFT_249
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_249 not in the Motif Atlas
- Homologous match to IL_9DFE_111
- Geometric discrepancy: 0.2355
- The information below is about IL_9DFE_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.5
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9GFT|1|AW|G|23
9GFT|1|AW|G|24
9GFT|1|AW|U|25
9GFT|1|AW|C|26
9GFT|1|AW|C|27
9GFT|1|AW|C|28
*
9GFT|1|AW|G|56
9GFT|1|AW|A|57
9GFT|1|AW|A|58
9GFT|1|AW|A|59
9GFT|1|AW|C|60
Current chains
- Chain AW
- 5S ribosomal RNA
Nearby chains
- Chain Aa
- Large ribosomal subunit protein uL5
- Chain Aj
- Large ribosomal subunit protein uL18
Coloring options: