IL_9GFT_299
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAAC*GGG
- Length
- 8 nucleotides
- Bulged bases
- 9GFT|1|N|G|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_299 not in the Motif Atlas
- Homologous match to IL_5J7L_291
- Geometric discrepancy: 0.1675
- The information below is about IL_5J7L_291
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
9GFT|1|N|C|1319
9GFT|1|N|C|1320
9GFT|1|N|A|1321
9GFT|1|N|A|1322
9GFT|1|N|C|1323
*
9GFT|1|N|G|1331
9GFT|1|N|G|1332
9GFT|1|N|G|1333
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain f
- Large ribosomal subunit protein uL22
- Chain g
- Large ribosomal subunit protein uL23
- Chain s
- VemP nascent chain
Coloring options: