IL_9GFT_304
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAG*CCUGC
- Length
- 9 nucleotides
- Bulged bases
- 9GFT|1|N|U|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_304 not in the Motif Atlas
- Homologous match to IL_5J7L_296
- Geometric discrepancy: 0.1039
- The information below is about IL_5J7L_296
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_58112.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
9GFT|1|N|G|1432
9GFT|1|N|A|1433
9GFT|1|N|A|1434
9GFT|1|N|G|1435
*
9GFT|1|N|C|1557
9GFT|1|N|C|1558
9GFT|1|N|U|1559
9GFT|1|N|G|1560
9GFT|1|N|C|1561
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain P
- Large ribosomal subunit protein uL2
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