IL_9GFT_326
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAUUGAUG*UUGAUCGAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_326 not in the Motif Atlas
- Homologous match to IL_5J7L_387
- Geometric discrepancy: 0.11
- The information below is about IL_5J7L_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61249.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
9GFT|1|N|U|1851
9GFT|1|N|U|1852
9GFT|1|N|A|1853
9GFT|1|N|A|1854
9GFT|1|N|U|1855
9GFT|1|N|U|1856
9GFT|1|N|G|1857
9GFT|1|N|A|1858
9GFT|1|N|U|1859
9GFT|1|N|G|1860
*
9GFT|1|N|U|1882
9GFT|1|N|U|1883
9GFT|1|N|G|1884
9GFT|1|N|A|1885
9GFT|1|N|U|1886
9GFT|1|N|C|1887
9GFT|1|N|G|1888
9GFT|1|N|A|1889
9GFT|1|N|A|1890
9GFT|1|N|G|1891
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL1
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