IL_9GFT_354
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GFT_354 not in the Motif Atlas
- Homologous match to IL_5J7L_346
- Geometric discrepancy: 0.1156
- The information below is about IL_5J7L_346
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9GFT|1|N|C|2652
9GFT|1|N|U|2653
9GFT|1|N|A|2654
9GFT|1|N|G|2655
9GFT|1|N|U|2656
9GFT|1|N|A|2657
9GFT|1|N|C|2658
*
9GFT|1|N|G|2663
9GFT|1|N|G|2664
9GFT|1|N|A|2665
9GFT|1|N|C|2666
9GFT|1|N|C|2667
9GFT|1|N|G|2668
Current chains
- Chain N
- 23S RNA
Nearby chains
- Chain T
- Large ribosomal subunit protein uL6
Coloring options: