IL_9GHC_104

3D structure

PDB id

9GHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

9GHC|1|a|U|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GHC_104 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.3177

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

9GHC|1|a|G|1059
9GHC|1|a|U|1060
9GHC|1|a|U|1061
9GHC|1|a|G|1062
*
9GHC|1|a|C|1076
9GHC|1|a|A|1077
9GHC|1|a|U|1078
9GHC|1|a|C|1079

Current chains

Chain a

23S rRNA

Nearby chains